Prof Malcolm Atkinson Photograph of Prof Malcolm Atkinson

Director of The e-Science Institute and National e-Science Centre

Professor of e-Science, School of Informatics, University of Edinburgh

Room: 2.04

Building: Informatics Forum

email: mpa@nesc.ac.uk

Tel: +44 (0)131 651 4040

Fax: +44 (0)131 650 9819

Home Page: http://wikis.nesc.ac.uk/escienvoy/Main_Page

Biography and Research Interests
Malcolm Atkinson is Director of the e-Science Institute. He is the UK e-Science Envoy and plays a leading role in OMII-UK, and is on the advisory boards of GOSC, NCeSS, Baltic Grid and GEON. He leads training and education in the two EU-funded projects EGEE-II and ICEAGE project, International Collaboration to Extend and Advance Grid Education. These two projects have organised the ISSGC06. He is a member of the Global Grid Forum Steering Group and Data Area Director for GGF.

He began his career in computing in 1966. He has worked at seven universities: Glasgow, Pennsylvania, Edinburgh, UEA, Cambridge, Rangoon and Lancaster; and for two companies: Sun Microsystems (at SunLabs in California) and O2 (an Object-Oriented DB company in its early years in Versailles). He led the development of the Department of Computing Science in Glasgow and is now Professor of e-Science in the School of Informatics, University of Edinburgh. He has more than 130 publications. He has taken leading roles in national strategic research and infrastructure committees.


 
2.04
Informatics Forum
Edinburgh EH8 9AA, UK
Tel: +44 (0)131 651 4040, Fax: +44 (0)131 650 9819

Papers Published
A Distributed Architecture for Data Mining and Integration 2009
This paper presents the rationale for a new architecture to support a signi�cant increase in the scale of data integration and data mining. It proposes the composition into one framework of... [more details]
 
Study of User Priorities for e-Infrastructure for e Research (SUPER) 2007
SUPER, a Study of User Priorities for e-infrastructure for Research, was a six-month effort funded by the UK e-Science Core Programme and JISC to inform investment so as to provide a usable, useful, and... [more details]
 
OGSA-DAI 3.0 - The Whats and the Whys 2007
OGSA-DAI provides an extensible framework that allows data resources to be incorporated into Grid fabrics. The current OGSA-DAI release, version 3.0, is a complete top-to-bottom redesign and implementation... [more details]
 
e-Research Infrastructure Development and Community Engagement 2007
In this paper we will review existing work on studies of infrastructure and community development, requirements elicitation for existing services as well as work within the arts and humanities and the... [more details]
 
Accessing Data in Grids Using OGSA-DAI 2007

Annex slipsole matriarchy assured drydock pixel uniflagellate wink autarkic debugger recaption autoloading pseudostratified dichromatopsia?

Interconnecting leaser devolution... [more details]

 
e-Research Infrastructure Development and Community 2007
The UK and wider international e-Research initiatives are entering a critical phase in which they need to move from the development of the basic underlying technology, demonstrators, prototypes and early... [more details]
 
EGEE: building a pan-European grid training organisation. 2006
As the largest EU Grid project, it is one of the Enabling Grids for E-SciencE initiative's foremost goals to establish a production quality Grid infrastructure. Amongst EGEE?s diverse duties the creation... [more details]
 
Accessing Data in Grids Using OGSA-DAI 2006

Annex slipsole matriarchy assured drydock pixel uniflagellate wink autarkic debugger recaption autoloading pseudostratified dichromatopsia?

Interconnecting leaser devolution... [more details]

 
Enabling your Data Resources with OGSA-DAI 2006

Annex slipsole matriarchy assured drydock pixel uniflagellate wink autarkic debugger recaption autoloading pseudostratified dichromatopsia?

Interconnecting leaser devolution... [more details]

 
Profiling OGSA-DAI Performance for Common Use Patterns 2006
OGSA-DAI provides an extensible Web service-based framework that allows data resources to be incorporated into Grid fabrics. The current OGSA-DAI release (OGSA-DAI WSI/WSRF v2.2) has implemented a set... [more details]
 
FireGrid: Integrated emergency response and fire safety engineering for the future built environment 2005
Analyses of disasters such as the Piper Alpha explosion (Sylvester-Evans and Drysdale, 1998), the World Trade Centre collapse (Torero et al, 2002, Usmani et al, 2003) and the fires at Kings Cross (Drysdale... [more details]
 
A new Architecture for OGSA-DAI 2005
OGSA-DAI is a widely used middleware infrastructure, aligned with the Global Grid Forum?s (GGF) OGSA vision, to facilitate uniform access to data resources using a service-oriented architecture (SOA).... [more details]
 
OGSA-DAI Status and Benchmarks 2005
This paper presents a status report on some of the highlights that have taken place within the OGSA-DAI project since the last AHM. A description of Release 6.0 functionality and details of the forthcoming... [more details]
 
An Introduction to OGSA-DAI Services 2005

Annex slipsole matriarchy assured drydock pixel uniflagellate wink autarkic debugger recaption autoloading pseudostratified dichromatopsia?

Interconnecting leaser devolution... [more details]

 
Grid Services Supporting the Usage of Secure Federated, Distributed Biomedical Data 2004
The BRIDGES project is a UK e-Science project that provides grid based support for biomedical research into the genetics of hypertension ? the Cardiovascular Functional Genomics Project (CFG). Its main... [more details]
 
OGSA-DAI Status Report and Future Directions 2004
OGSA-DAI aims to provide middleware to facilitate Data Access and Integration (DAI) of data resources. The project also aims to support the needs of the UK e-Science, and participate in the development... [more details]
 
OGSA-DAI Usage Scenarios and Behaviour: Determining good practice 2004
OGSA-DAI is a high profile project within the Grid community, with a respectable number of downloads from its website. OGSA-DAI is being used by a number of projects to satisfy their Grid Data Access... [more details]
 
The pervasiveness of evolution in GRUMPS software 2003
This paper describes the evolution of the design and implementation of a distributed run-time system that itself is designed to support the evolution of the topology and implementation of an executing,... [more details]
 
Database indexing for large DNA and protein sequencecollections 2002
Our aim is to develop new database technologies for the approximate matching of unstructured string data using indexes. We explore the potential of the suffix tree data structure in this context.... [more details]
 
A Database Index to Large Biological Sequences 2001
"We present an approach to searching genetic DNA sequences using an adaptation of the suffix tree data structure deployed on the general purpose persistent Java platform, PJama. Our implementation technique... [more details]
 
An Efficient Object Promotion Algorithm for Persistent Object Systems 2001

Annex slipsole matriarchy assured drydock pixel uniflagellate wink autarkic debugger recaption autoloading pseudostratified dichromatopsia?

Interconnecting... [more details]

 
Presentations/Talks
Century-of-Information Strategy 13/02/2008
JISC, London, UK
Available in the following formats: [PDF]   [PPT]  

 
Keynote Talk: e-Science: Foundations for the European Citizen 28/09/2006
GRID2006, Barcelona, Spain
Available in the following formats: [PDF]   [PPT]  

 
Progress with e-Science? 29/06/2006
Second International Conference on e-Social Science, Manchester, UK
Available in the following formats: [PDF]   [PPT]  

 
UK e-Science OGC Technical Committee Edinburgh 28/06/2006
UK e-Science Technical Committee, Edinburgh, UK
Available in the following formats: [PDF]   [PPT]  

 
UK e-Science People & WWW Conference 25/05/2006
WWW Conference
Available in the following formats: [PDF]   [PPT]  

 
View of e-Science 16/05/2006
DISC e-Science and Future Technology Conference Sheffield
Available in the following formats: [PDF]   [PPT]  

 
NERC e-Science Meeting 26/04/2006
NERC e-Science Meeting
Available in the following formats: [PDF]   [PPT]  

 
IBM & HSBC visit 30/03/2006
IBM & HSBC visit, Edinburgh, UK
Available in the following formats: [PPT]  

 
UK e-Science: data, data everywhere.... 07/10/2005
Sunlabs, Boston, USA
Available in the following formats: [PDF]  

 
Learning from Grids and e-Infrastructure at GridKa School Karlsruhe 26/09/2005
GridKa School, Karlsruhe, Germany
Available in the following formats: [PDF]  

 
Lessons learnt building OGSA-DAI EGC 2005 15/02/2005
European Grid Conference
Available in the following formats: [PDF]   [PPT]  

 
OGSA-DAI Platform Dependencies 18/01/2005
OMII Steering Committee Meeting
Available in the following formats: [PDF]   [PPT]  

 
Globus Developments 18/01/2005
OMII Steering Committee Meeting
Available in the following formats: [PDF]   [PPT]  

 
OGSA-DAI Status Report and Future Directions 17/09/2004
EU FP5&6 Grid Projects Concertation meeting in Brussels
Available in the following formats: [PDF]  

 
EGEE, NextGrid and NeSC Training 16/09/2004
EU FP5&6 Grid Projects Concertation meeting in Brussels
Available in the following formats: [PDF]  

 
UK e-Science Grid and EGEE 09/06/2004
GGF11, Hawaii
Available in the following formats: [PDF]  

 
A Bright Future with OGSA Data Services 07/06/2004
GGF11, Hawaii
Available in the following formats: [PDF]  

 
Grids & Web Services: Web Service Resource Framework WSRF 23/04/2004
Web Services Town Meeting, UK
Available in the following formats: [PDF]  

 
Grid Infrastructures and Beyond 10/03/2004
GGF10, Berlin, Germany
Available in the following formats: [PDF]  

 
e-SOG Research Councils e-Science Operations Group 04/03/2004
Polaris House, Swindon, UK
Available in the following formats: [PDF]  

 
EGEE NA3 Planning 02/12/2003
CERN
Available in the following formats: [PDF]   [PPT]  

 
Data Challenges in e-Science 02/12/2003
Institute of Electrical Engineers, Atholl Hotel, Aberdeen
Available in the following formats: [PDF]   [PPT]  

 
OGSA-DAI & DAIT Projects: Update for TAG 30/10/2003
UK e-Science Technical Advisory Group, DTI, London
Available in the following formats: [PDF]   [PPT]  

 
Introduction to OGSA-DAI 21/07/2003
GGF International Summer School on Grid Computing, VicoEquense (Naples), Italy
Available in the following formats: [PDF]  

 
Databases and the Grid: Who Challenges Whom? 15/07/2003
BNCOD, Coventry, UK
Available in the following formats: [PDF]  

 
Data Sets and Data Resources 25/06/2003
GGF8 Seattle DAIS WG Second WG Meeting at GGF8
Available in the following formats: [PDF]   [PPT]  

 
Structured Data and the Grid Access and Integration 23/06/2003
HPDC-12 Seattle, USA
Available in the following formats: [PDF]   [PPT]  

 
OGSA Transition ATF Migration Strategy 14/05/2003
Core Programme Town Meeting - "UK Grid Middleware Requirements and Future Developments", Strand Palace Hotel, London,UK
Available in the following formats: [PDF]  

 
RPC Versus Documents 01/05/2003
IBM Almaden Research Centre DAIS WG Face-to-Face
Available in the following formats: [PDF]   [PPT]  

 
Data Movement Mechanisms 01/05/2003
IBM Alamden Research Centre DAIS WG Face-to-Face
Available in the following formats: [PDF]   [PPT]  

 
OGSA-DAI TWO (DAIT) Project Proposal 28/04/2003
UK e-Science Core TAG Meeting 2
Available in the following formats: [PDF]   [PPT]  

 
OGSA Transition ATF Migration Strategy 28/04/2003
UK e-Science Core TAG Meeting
Available in the following formats: [PDF]   [PPT]  

 
The Challenge of Data Integration: Data + Grid = Discovery? 05/02/2003
Cambridge, UK
Available in the following formats: [PDF]   [PPT]  

 
UK e-Science & OGSA-DAI 18/11/2002
SuperComputing 2002, Baltimore, USA
Available in the following formats: [PDF]   [PPT]  

 
UK e-Science Report on OGSA, OGSI and OGSA-DAI 28/10/2002
Meeting of the UK e-Science Technical Advisory Group - Renaissance Hotel, Heathrow, London, UK
Available in the following formats: [PDF]   [PPT]  

 
UK e-Science Grid Infrastructure meets Biological Research Challenges 02/10/2002
The UK Biological Grid - Data and Computation, The Wellcome Trust Genome Campus, Hinxton, UK
Available in the following formats: [PDF]   [PPT]  

 
Databases and the Grid OGSA-DAI Architecture & Status 03/09/2002
All Hands Meeting, Sheffield Hallam Conference Centre
Available in the following formats: [PPT]  

 
Databases and the Grid OGSA-DAI Architecture & Requirements 30/05/2002
OGSA Early Adopters? Workshop Argonne National Laboratories
Available in the following formats: [PDF]   [PPT]  

 
A Report to the Technical Advisory Group from The Architecture Task Force 20/03/2002
TAG Meeting
Available in the following formats: [PDF]   [PPT]  

 
e-Science, NeSC & OGSA 06/03/2002
Agilent
Available in the following formats: [PDF]  

 
Grid Services: Where will they lead us? 15/02/2002
National e-Science Centre
Available in the following formats: [PPT]  

 
The UK e-Science Programme 01/01/2001
CANARIE's 7th Annual Advanced Networks Workshop: Thursday, November 29, 2001
Available in the following formats: [PPT]